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nipype documentation

Documentation - Michael Notter's Nipype guide. Be sure to read Michael's excellent tutorials. Interfaces, Workflows and Examples. Workflows. workflows.data · workflows.dmri

Documentation - Download and install · Running Nipype in a VM · Tutorial : Interfaces Tools · Running Nipype Interfaces from the command line (nipype_cmd).

nipype Documentation - nipype Documentation, Release 1.2.0. 2.8.2 all_fsl_pipeline(). Link to code. Workflow that integrates FSL topup and eddy. Warning: this

Nipype Tutorial - nipype Documentation, Release 0.14.0. 1.2.1 Interface caching: why and how. • Pipelines (also called workflows) specify processing by an

Neuroimaging in Python - Welcome to the Nipype Tutorial! It covers the basic concepts and most common use cases of Nipype and will teach you everything so that you can start creating

nipy/nipype: Workflows and interfaces for neuroimaging - Documentation · About · Nipy Changes in Nipype a Python script · Working with nipype source code · Architecture (discussions from 2009)

nipype Documentation - Workflows and interfaces for neuroimaging packages - nipy/nipype. Please see the doc/README.txt document for information on our documentation.

python-nipype-doc – Neuroimaging data analysis pipelines in - nipype Documentation Release 0.12.0 Neuroimaging in Python team August 04, 2016, 00:17 PDT Contents 1 2 User Guide 1.1 Download and install .

lyman - Nipype interfaces Python to other neuroimaging packages and creates an API This package contains Nipype examples and documentation in various formats.

nipype wrapper

How to wrap a command line tool - In Nipype we use Enthought Traits to define inputs and outputs of the interfaces. As with all interfaces command line wrappers need to have inputs defined.

How to wrap a Python script - How to wrap a Python script¶. This is a minimal pure python interface. As you can see all you need to do is to do is to define inputs, outputs, _run_interface() (not

Using Nipype Plugins - In order to use nipype with SGE or PBS you simply need to call: . This is useful for wrapper script that execute certain functionality prior or after a node runs.

Nipype Beginner's Guide - Nipype allows you to pipeline your neuroimaging workflow in an intuitive way . Interfaces in the context of Nipype are program wrappers that enable Nipype,

Neuroimaging in Python - Installing nipype from the conda-forge channel can be achieved by adding any of them, install nipype's wrapper package ( nipype.interfaces ), then install the

Changes in Nipype - ENH: Provides a Nipype wrapper for antsJointFusion (https://github.com/nipy/ nipype/pull/1351); ENH: Added support for PETPVC

How to wrap C++, R, java, or other scripts with Nipype? · Issue - Summary I only found nipype wrappers for Matlab and Python codes. How is possible to directly wrap scripts written in other programming

PETPVC wrapper · Issue #1332 · nipy/nipype · GitHub - Hi, I have a wrapper for PETPVC, a new tool (very needed) for partial volume correction of PET images. The wrapper code is here. Do you think

Create nipype OutputSpec at runtime? - nipype - Hello, I am writing nipype wrappers for my C++ tools. I have hit a problem that one particular tool of mine generates different numbers of output files (with

Nipype: a flexible, lightweight and extensible neuroimaging data - to the BRAINSABC for new features (https://github.com/nipy/nipype/pull/1322) ENH: Provides a Nipype wrapper for ANTs DenoiseImage

Error processing SSI file